Search results for "Hairpins"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
111	Atsushi Kameda, Masahito Yamamoto, Azuma Ohuchi, Satsuki Yaegashi, Masami Hagiya	Unravel four hairpins!	Nat. Comput.	2008	DBLP DOI BibTeX RDF	Molecular machine, DNA computing, Molecular computing, DNA nanotechnology, Molecular memory
111	Atsushi Kameda, Masahito Yamamoto, Azuma Ohuchi, Satsuki Yaegashi, Masami Hagiya	Unravel Four Hairpins!	DNA	2006	DBLP DOI BibTeX RDF
97	Michael Domaratzki	Hairpin Structures Defined by DNA Trajectories.	Theory Comput. Syst.	2009	DBLP DOI BibTeX RDF	Hairpins, DNA trajectories, DNA words, Formal languages
61	Michael Domaratzki	Hairpin Structures Defined by DNA Trajectories.	DNA	2006	DBLP DOI BibTeX RDF
50	Gail S. Blaustein, Frederick D. Lewis, Alexander L. Burin, Rajesh Shrestha	The Kinetics of Charge Recombination in DNA Hairpins Controlled by Counterions.	ICCS (2)	2009	DBLP DOI BibTeX RDF	DNA hairpin, charge transfer, counterions
29	Koya Sakuma, Shintaro Minami	Enumeration and comprehensive in-silico modeling of three-helix bundle structures composed of typical αα-hairpins.	BMC Bioinform.	2021	DBLP DOI BibTeX RDF
29	Johannes Vater, Matthias Pollach, Claus Lenz, Daniel Winkle, Alois C. Knoll	Quality Control and Fault Classification of Laser Welded Hairpins in Electrical Motors.	EUSIPCO	2020	DBLP DOI BibTeX RDF
29	Yunhui Ge, Brandon L. Kier, Niels H. Andersen, Vincent A. Voelz	Computational and Experimental Evaluation of Designed β-Cap Hairpins Using Molecular Simulations and Kinetic Network Models.	J. Chem. Inf. Model.	2017	DBLP DOI BibTeX RDF
29	Abeer Eshra, Shalin Shah, John H. Reif	DNA Hairpin Gate: A Renewable DNA Seesaw Motif Using Hairpins.	CoRR	2017	DBLP BibTeX RDF
29	Muserref Duygu Saçar, Hamid Hamzeiy, Jens Allmer	Can MiRBase Provide Positive Data for Machine Learning for the Detection of MiRNA Hairpins?	J. Integr. Bioinform.	2013	DBLP DOI BibTeX RDF
29	Anette Thyssen Jonstrup, Jacob Fredsøe, Anni Hangaard Andersen	DNA Hairpins as Temperature Switches, Thermometers and Ionic Detectors.	Sensors	2013	DBLP DOI BibTeX RDF
29	Richard Beal, Donald A. Adjeroh, Ahmed Abbasi	The Forward Stem Matrix: An Efficient Data Structure for Finding Hairpins in RNA Secondary Structures.	BCB	2013	DBLP DOI BibTeX RDF
29	Sébastien Tempel, Nicolas Pollet, Fariza Tahi	ncRNAclassifier: a tool for detection and classification of transposable element sequences in RNA hairpins.	BMC Bioinform.	2012	DBLP DOI BibTeX RDF
29	Hsun-Wen Chang, Siang-Ning Zeng	Enumeration of RNA Hairpins and Cloverleaves.	Electron. Notes Discret. Math.	2011	DBLP DOI BibTeX RDF
29	Ho-Lin Chen, Anne Condon, Hosna Jabbari	An O(n5) Algorithm for MFE Prediction of Kissing Hairpins and 4-Chains in Nucleic Acids.	J. Comput. Biol.	2009	DBLP DOI BibTeX RDF
29	Sung-Chou Li, Cheng-Kai Shiau, Wen-Chang Lin	Vir-Mir db: prediction of viral microRNA candidate hairpins.	Nucleic Acids Res.	2008	DBLP DOI BibTeX RDF
29	Stanley Ng Kwang Loong, Santosh K. Mishra	De novo SVM classification of precursor microRNAs from genomic pseudo hairpins using global and intrinsic folding measures.	Bioinform.	2007	DBLP DOI BibTeX RDF
29	Jana Hertel, Peter F. Stadler	Hairpins in a Haystack: recognizing microRNA precursors in comparative genomics data.	ISMB (Supplement of Bioinformatics)	2006	DBLP DOI BibTeX RDF
29	Masami Hagiya, Satsuki Yaegashi, Keiichiro Takahashi	Computing with Hairpins and Secondary Structures of DNA.	Nanotechnology: Science and Computation	2006	DBLP DOI BibTeX RDF
29	Karol Szafranski, Molly Megraw, Martin Reczko, Artemis G. Hatzigeorgiou	Support Vector Machines for Predicting microRNA Hairpins.	BIOCOMP	2006	DBLP BibTeX RDF
29	Hagit Shatkay	Hairpins in bookstacks: Information retrieval from biomedical text.	Briefings Bioinform.	2005	DBLP DOI BibTeX RDF
29	Manish Kumar 0005, Manoj Bhasin, Navjot K. Natt, G. P. S. Raghava	BhairPred: prediction of ß-hairpins in a protein from multiple alignment information using ANN and SVM techniques.	Nucleic Acids Res.	2005	DBLP DOI BibTeX RDF
29	Kazuyoshi Ikeda, Oxana V. Galzitskaya, Haruki Nakamura, Junichi Higo	beta-Hairpins, alpha-helices, and the intermediates among the secondary structures in the energy landscape of a peptide from a distal beta-hairpin of SH3 domain.	J. Comput. Chem.	2003	DBLP DOI BibTeX RDF
29	Bo Liao, Tian-Ming Wang	General Combinatorics of RNA Hairpins and Cloverleaves.	J. Chem. Inf. Comput. Sci.	2003	DBLP DOI BibTeX RDF
29	Philippe Derreumaux	Predicting helical hairpins from sequences by Monte Carlo simulations.	J. Comput. Chem.	2000	DBLP DOI BibTeX RDF
29	A. Slama-Schwok, F. Peronnet, E. Hantz-Brachet, E. Taillandier, M.-P. Teulade-Fichou, J.-P. Vigneron, M. Best-Belpomme, J.-M. Lehn	A macrocyclic bis-acridine shifts the equilibrium from duplexes towards DNA hairpins.	Nucleic Acids Res.	1997	DBLP DOI BibTeX RDF
29	Tony L. Eng	Linear DNA self-assembly with hairpins generates linear context-free grammars.	DNA Based Computers	1997	DBLP DOI BibTeX RDF
29	L. E. Xodo, G. Manzini, F. Quadrifoglio, Gijs A. van der Marel, Jacques H. van Boom	Thermodynamic behaviour of the heptadecadeoxynucleotide d(CGCGCGTTTTTCGCGCG) forming B and Z hairpins in aqueous solution.	Nucleic Acids Res.	1986	DBLP DOI BibTeX RDF
20	Hamidreza Chitsaz, Rolf Backofen, Süleyman Cenk Sahinalp	biRNA: Fast RNA-RNA Binding Sites Prediction.	WABI	2009	DBLP DOI BibTeX RDF
20	Hendrik Jan Hoogeboom, Walter A. Kosters, Jeroen F. J. Laros	Selection of DNA Markers.	IEEE Trans. Syst. Man Cybern. Part C	2008	DBLP DOI BibTeX RDF
20	Lila Kari, Kalpana Mahalingam, Gabriel Thierrin	The syntactic monoid of hairpin-free languages.	Acta Informatica	2007	DBLP DOI BibTeX RDF
20	Hosna Jabbari, Anne Condon, Ana Pop, Cristina Pop 0004, Yinglei Zhao	HFold: RNA Pseudoknotted Secondary Structure Prediction Using Hierarchical Folding.	WABI	2007	DBLP DOI BibTeX RDF	Secondary Structure Prediction, Folding Pathways, Hierarchical Folding, RNA, Pseudoknot
20	Can Alkan, Emre Karakoç, Süleyman Cenk Sahinalp, Peter J. Unrau, H. Alexander Ebhardt, Kaizhong Zhang, Jeremy Buhler	RNA Secondary Structure Prediction Via Energy Density Minimization.	RECOMB	2006	DBLP DOI BibTeX RDF
20	John A. Rose, Ken Komiya, Satsuki Yaegashi, Masami Hagiya	Displacement Whiplash PCR: Optimized Architecture and Experimental Validation.	DNA	2006	DBLP DOI BibTeX RDF
20	Atsushi Kameda, Masahito Yamamoto, Hiroki Uejima, Masami Hagiya, Kensaku Sakamoto, Azuma Ohuchi	Hairpin-based state machine and conformational addressing: Design and experiment.	Nat. Comput.	2005	DBLP DOI BibTeX RDF	molecluar machine, DNA computing, molecular computing, molecular memory
20	Lila Kari, Stavros Konstantinidis, Elena Losseva, Petr Sosík, Gabriel Thierrin	Hairpin Structures in DNA Words.	DNA	2005	DBLP DOI BibTeX RDF
20	Zhenglin Hou, Cunxi Wang, Odd-Arne Olsen	TPR Packing Analysis and 3D Modeling for the HAT Domain of Human Crooked Neck Protein.	CSB Workshops	2005	DBLP DOI BibTeX RDF
20	Christopher Maher, Marja Timmermans, Lincoln Stein, Doreen Ware	Identifying MicroRNAs in Plant Genomes.	CSB	2004	DBLP DOI BibTeX RDF
20	Giulio Pavesi, Giancarlo Mauri, Graziano Pesole	Predicting Conserved Hairpin Motifs in Unaligned RNA Sequences.	ICTAI	2003	DBLP DOI BibTeX RDF
20	John A. Rose, Russell J. Deaton, Masami Hagiya, Akira Suyama	PNA-mediated Whiplash PCR.	DNA	2001	DBLP DOI BibTeX RDF