Search results for "MAPK"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
78	Stephen Gilmore, Jane Hillston	Foreword.	SIGMETRICS Perform. Evaluation Rev.	2008	DBLP DOI BibTeX RDF
78	Padhraig Gormley, Kang Li 0002, George W. Irwin	Modelling the MAPK Signalling Pathway Using a Two-Stage Identification Algorithm.	LSMS (2)	2007	DBLP DOI BibTeX RDF	MAPK, structure selection, orthogonal least squares, iterative subset selection, Systems biology, system identification, signal transduction
52	Dongming Wang 0001, Bican Xia	Stability analysis of biological systems with real solution classification.	ISSAC	2005	DBLP DOI BibTeX RDF	Cdc2-cyclin B/Wee1, Mos/MEK/p42 MAPK cascade, solution classification, stability, differential equations, equilibrium, polynomial system, biological network, real root
46	Gabriel Querrec, Vincent Rodin, Jean François Abgrall, Sébastien Kerdélo, Jacques Tisseau	Uses of Multiagents Systems for Simulation of MAPK Pathway.	BIBE	2003	DBLP DOI BibTeX RDF
39	Shanhong Zheng, Chunguang Zhou, Guixia Liu	Signaling Pathway Reconstruction by Fusing Priori Knowledge.	ICIC (1)	2009	DBLP DOI BibTeX RDF	Pathway prediction, HMM model, Biochemical reaction information, Signaling transduction
39	Chenxi Shao, Hongli Deng	A Novel Approach for Signal Transduction Networks Simulation at a Mesoscopic Level.	BIBE	2007	DBLP DOI BibTeX RDF
39	Jittisak Senachak, Mun'delanji Vestergaard, René Vestergaard	Cascaded Games.	AB	2007	DBLP DOI BibTeX RDF
26	Pawel Nalecz-Jawecki, Paolo Armando Gagliardi, Marek Kochanczyk, Coralie Dessauges, Olivier Pertz, Tomasz Lipniacki	The MAPK/ERK channel capacity exceeds 6 bit/hour.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
26	Hiraku Miyagi, Michio Hiroshima, Yasushi Sako	Cell-to-cell diversification in ERBB-RAS-MAPK signal transduction that produces cell-type specific growth factor responses.	Biosyst.	2021	DBLP DOI BibTeX RDF
26	Eric Durandau, Serge Pelet	Cross-regulation between CDK and MAPK control cellular fate.	Quant. Biol.	2021	DBLP DOI BibTeX RDF
26	V. K. Md. Aksam, V. M. Chandrasekaran 0001, Pandurangan Sundaramurthy	Neural network based prediction of less side effect causing cancer drug targets in the network of MAPK pathways.	Int. J. Bioinform. Res. Appl.	2021	DBLP DOI BibTeX RDF
26	Manuel Jurado, Óscar Castaño, Antonio Zorzano	Stochastic modulation evidences a transitory EGF-Ras-ERK MAPK activity induced by PRMT5.	Comput. Biol. Medicine	2021	DBLP DOI BibTeX RDF
26	Daniel Lichtblau	Symbolic analysis of multiple steady states in a MAPK chemical reaction network.	J. Symb. Comput.	2021	DBLP DOI BibTeX RDF
26	Nilima R. Das, P. Ganga Raju Achary, S. C. Rai	QSAR and Molecular Docking Studies for the Inhibition of MAPK Interacting Kinase.	OCIT	2021	DBLP DOI BibTeX RDF
26	Ying Li 0034, Ya Jie Liu, Shu Bin Wang, Eun Ha Choi, Ihn Han	Non-Thermal Bio-Compatible Plasma Induces Osteogenic Differentiation of Human Mesenchymal Stem/Stromal Cells With ROS-Induced Activation of MAPK.	IEEE Access	2020	DBLP DOI BibTeX RDF
26	Adnan El Moussawi, Arnaud Giacometti, Nicolas Labroche, Arnaud Soulet	MAPK-means: A clustering algorithm with quantitative preferences on attributes.	Intell. Data Anal.	2020	DBLP DOI BibTeX RDF
26	Jiarui Li	Ras mutations in the Erk-MAPK pathway and Cancer: Alternate therapies examined in an ODE-based computational model.	ISAIMS	2020	DBLP DOI BibTeX RDF
26	V. K. Md. Aksam, V. M. Chandrasekaran 0001, Pandurangan Sundaramurthy	Protein Domain Level Cancer Drug Targets in the Network of MAPK Pathways.	IEEE ACM Trans. Comput. Biol. Bioinform.	2019	DBLP DOI BibTeX RDF
26	Nimisha Asati, Abhinav Mishra, Ankita Shukla, Tiratha Raj Singh	Gene Expression Studies to Identify Significant Genes in AR, MTOR, MAPK Pathways and their Overlapping Regulatory Role in Prostate Cancer.	J. Integr. Bioinform.	2019	DBLP DOI BibTeX RDF
26	Li Meng, Zhijun Huang	In silico-in vitro discovery of untargeted kinase-inhibitor interactions from kinase-targeted therapies: A case study on the cancer MAPK signaling pathway.	Comput. Biol. Chem.	2018	DBLP DOI BibTeX RDF
26	Min Song, Stacey D. Finley	Mechanistic insight into activation of MAPK signaling by pro-angiogenic factors.	BMC Syst. Biol.	2018	DBLP DOI BibTeX RDF
26	V. K. M. D. Aksam, V. M. Chandrasekaran 0001, Pandurangan Sundaramurthy	Cancer drug target identification and node-level analysis of the network of MAPK pathways.	Netw. Model. Anal. Health Informatics Bioinform.	2018	DBLP DOI BibTeX RDF
26	Alok Kumar Maity, Pinaki Chaudhury, Suman K. Banik	Information Theoretical Study of Cross-Talk Mediated Signal Transduction in MAPK Pathways.	Entropy	2017	DBLP DOI BibTeX RDF
26	Antje Jensch, Caterina Thomaseth, Nicole Radde	Sampling-based Bayesian approaches reveal the importance of quasi-bistable behavior in cellular decision processes on the example of the MAPK signaling pathway in PC-12 cell lines.	BMC Syst. Biol.	2017	DBLP DOI BibTeX RDF
26	Giulia Russo, Marzio Pennisi, Roberta Boscarino, Francesco Pappalardo 0001	Modeling PI3K/PDK1/Akt and MAPK Signaling Pathways Using Continuous Petri Nets.	ICIC (2)	2017	DBLP DOI BibTeX RDF
26	Zurah Bibi, Jamil Ahmad, Rehan Zafar Paracha, Amnah Siddiqa	Modeling and analysis of the signaling crosstalk of PI3K, AMPK and MAPK with Timed Hybrid Petri Nets approach.	ICCSA (7)	2017	DBLP DOI BibTeX RDF
26	Deepak Nedunuri, Yesu Babu Adimulam, Kiran Kumar Reddi 0001	In silico pathway analysis of MAPKs and computational investigation of bipyrazole analogues as novel p38alpha MAPK inhibitors.	Int. J. Bioinform. Res. Appl.	2016	DBLP DOI BibTeX RDF
26	Joseph H. R. Hetmanski, Egor Zindy, Jean-Marc Schwartz, Patrick T. Caswell	A MAPK-Driven Feedback Loop Suppresses Rac Activity to Promote RhoA-Driven Cancer Cell Invasion.	PLoS Comput. Biol.	2016	DBLP DOI BibTeX RDF
26	Daniel C. Kirouac, Jinyan Du, Johanna Lahdenranta, Matthew D. Onsum, Ulrik B. Nielsen, Birgit Schoeberl, Charlotte F. McDonagh	HER2+ Cancer Cell Dependence on PI3K vs. MAPK Signaling Axes Is Determined by Expression of EGFR, ERBB3 and CDKN1B.	PLoS Comput. Biol.	2016	DBLP DOI BibTeX RDF
26	Joseph Cursons, Jerry Gao 0003, Daniel G. Hurley, Cristin G. Print, P. Rod Dunbar, Marc Jacobs, Edmund J. Crampin	Regulation of ERK-MAPK signaling in human epidermis.	BMC Syst. Biol.	2015	DBLP DOI BibTeX RDF
26	Joseph P. Dexter, Ping Xu, Jeremy Gunawardena, Megan N. McClean	Robust network structure of the Sln1-Ypd1-Ssk1 three-component phospho-relay prevents unintended activation of the HOG MAPK pathway in Saccharomyces cerevisiae.	BMC Syst. Biol.	2015	DBLP DOI BibTeX RDF
26	Huiming Peng, Tao Peng, Jianguo Wen, David A. Engler, Risë K. Matsunami, Jing Su, Le Zhang 0004, Chung-Che Jeff Chang, Xiaobo Zhou 0001	Characterization of p38 MAPK isoforms for drug resistance study using systems biology approach.	Bioinform.	2014	DBLP DOI BibTeX RDF
26	Marti Bernardo-Faura, Stefan Massen, Christine S. Falk, Nathan R. Brady, Roland Eils	Data-Derived Modeling Characterizes Plasticity of MAPK Signaling in Melanoma.	PLoS Comput. Biol.	2014	DBLP DOI BibTeX RDF
26	Youcef Derbal	State machine modeling of MAPK signaling pathways.	EMBC	2014	DBLP DOI BibTeX RDF
26	Vilda Purutçuoglu	Inference of the stochastic MAPK pathway by modified diffusion bridge method.	Central Eur. J. Oper. Res.	2013	DBLP DOI BibTeX RDF
26	Ryan Suderman, Eric J. Deeds	Machines vs. Ensembles: Effective MAPK Signaling through Heterogeneous Sets of Protein Complexes.	PLoS Comput. Biol.	2013	DBLP DOI BibTeX RDF
26	Luca Grieco, Laurence Calzone, Isabelle Bernard-Pierrot, François Radvanyi, Brigitte Kahn-Perlès, Denis Thieffry	Integrative Modelling of the Influence of MAPK Network on Cancer Cell Fate Decision.	PLoS Comput. Biol.	2013	DBLP DOI BibTeX RDF
26	Natalie B. Vinh, Jamie S. Simpson, Peter J. Scammells, David K. Chalmers	Virtual screening using a conformationally flexible target protein: models for ligand binding to p38α MAPK.	J. Comput. Aided Mol. Des.	2012	DBLP DOI BibTeX RDF
26	Uddipan Sarma, Indira Ghosh	Different designs of kinase-phosphatase interactions and phosphatase sequestration shapes the robustness and signal flow in the MAPK cascade.	BMC Syst. Biol.	2012	DBLP DOI BibTeX RDF
26	Alex Holehouse, Xian Yang 0001, Ian M. Adcock, Yike Guo	Developing a novel integrated model of p38 MAPK and glucocorticoid signalling pathways.	CIBCB	2012	DBLP DOI BibTeX RDF
26	George V. Popescu, Sorina C. Popescu	Complexity and Modularity of MAPK Signaling Networks.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
26	Abbas Sarraf Shirazi, Sebastian von Mammen, Christian Jacob 0001	Hierarchical self-organized learning in agent-based modeling of the MAPK signaling pathway.	IEEE Congress on Evolutionary Computation	2011	DBLP DOI BibTeX RDF
26	Franco Blanchini, Elisa Franco	Multistability and robustness of the MAPK pathway.	CDC/ECC	2011	DBLP DOI BibTeX RDF
26	Abbas Sarraf Shirazi, Sebastian von Mammen, Christian Jacob 0001	Adaptive Modularization of the MAPK Signaling Pathway Using the Multiagent Paradigm.	PPSN (2)	2010	DBLP DOI BibTeX RDF
26	Federica Ciocchetta, Adam Duguid, Maria Luisa Guerriero	A compartmental model of the cAMP/PKA/MAPK pathway in Bio-PEPA	MeCBIC	2009	DBLP DOI BibTeX RDF
26	Nicoletta Castagnino, Lorenzo Tortolina, Roberto Montagna, Raffaele Pesenti, Anahì Balbi, Silvio Parodi	Simulations of the EGFR - KRAS - MAPK Signalling Network in Colon Cancer. Virtual Mutations and Virtual Treatments with Inhibitors Have More Important Effects Than a 10 Times Range of Normal Parameters and Rates Fluctuations.	CIBB	2009	DBLP DOI BibTeX RDF
26	Po-Yuan Chen, Mien-De Jhuo, Wei-Tse Hsu, Tzu-Ching Shih, Tzu-Hurng Cheng	The MAPK Signal Pathway Research and New Drug Discovery.	BIBE	2009	DBLP DOI BibTeX RDF
26	Jinling Zhang, Yinghua Lu, Lin Wang 0006, Hongxin Zhang, Rongrong Li, Stefan Wölfl 0002	Single Linkage Clustering Fit for Establishing Theoretical MAPK/Erk Signaling Pathway in Human Soft Tissue Sarcoma Samples.	BMEI	2009	DBLP DOI BibTeX RDF
26	Dawn C. Walker, Nikolaos T. Georgopoulos, Jennifer Southgate	From pathway to population - a multiscale model of juxtacrine EGFR-MAPK signalling.	BMC Syst. Biol.	2008	DBLP DOI BibTeX RDF
26	Min Cheol Park, Moon Kyu Kwak, Hye Sung Cho, Kahp Y. Suh, Jae Young Hur, Sang-Hyun Park	Yeast on a Chip - Single-cell Analyses of MAPK Signaling Pathways in Saccharomyces Cerevisiae using Cell Chips.	BIODEVICES (2)	2008	DBLP BibTeX RDF
26	Liang Qiao, Robert B. Nachbar, Ioannis G. Kevrekidis, Stanislav Y. Shvartsman	Bistability and Oscillations in the Huang-Ferrell Model of MAPK Signaling.	PLoS Comput. Biol.	2007	DBLP DOI BibTeX RDF
26	Losiana Nayak, Rajat K. De	An algorithm for modularization of MAPK and calcium signaling pathways: Comparative analysis among different species.	J. Biomed. Informatics	2007	DBLP DOI BibTeX RDF
26	Vilda Purutçuoglu, Ernst Wit	Bayesian inference of the kinetic parameters of a realistic MAPK/ERK pathway.	BMC Syst. Biol.	2007	DBLP DOI BibTeX RDF
26	Vilda Purutçuoglu, Ernst Wit	Exact and Approximate Stochastic Simulations of the MAPK Pathway and Comparisons of Simulations Results.	J. Integr. Bioinform.	2006	DBLP DOI BibTeX RDF
26	Geoffrey Koh, Huey Fern Carol Teong, Marie-Véronique Clément, David Hsu, P. S. Thiagarajan	A decompositional approach to parameter estimation in pathway modeling: a case study of the Akt and MAPK pathways and their crosstalk.	ISMB (Supplement of Bioinformatics)	2006	DBLP DOI BibTeX RDF
26	Nelilma Correia Romeiro, Magaly G. Albuquerque, Ricardo B. de Alencastro, Malini Ravi, Anton J. Hopfinger	Construction of 4D-QSAR Models for Use in the Design of Novel p38-MAPK Inhibitors.	J. Comput. Aided Mol. Des.	2005	DBLP DOI BibTeX RDF
26	David Talavera, Carles Ferrer-Costa, Modesto Orozco, Xavier de la Cruz	Comparative Study of MAPK 9 Alternative Splicing from Human and Mouse.	Spanish Bioinformatics Conference	2004	DBLP BibTeX RDF
20	Marc Bailly-Bechet, Alfredo Braunstein, Riccardo Zecchina	A Prize-Collecting Steiner Tree Approach for Transduction Network Inference.	CMSB	2009	DBLP DOI BibTeX RDF
20	François Fages, Sylvain Soliman	From Reaction Models to Influence Graphs and Back: A Theorem.	FMSB	2008	DBLP DOI BibTeX RDF
20	Zhiwen Yu 0002, Zhongkai Deng, Hau-San Wong	Identification of phosphorylation sites using a hybrid classifier ensemble approach.	ICPR	2008	DBLP DOI BibTeX RDF
20	Shanhong Zheng, Chunguang Zhou, Yanwen Li, Guixia Liu	Research on Signaling Pathway Reconstruction Based on HMM.	ICYCS	2008	DBLP DOI BibTeX RDF
20	François Fages, Sylvain Soliman	Formal Cell Biology in Biocham.	SFM	2008	DBLP DOI BibTeX RDF
20	Andrea Degasperi, Stephen Gilmore	Sensitivity Analysis of Stochastic Models of Bistable Biochemical Reactions.	SFM	2008	DBLP DOI BibTeX RDF
20	Aurélien Rizk, Grégory Batt, François Fages, Sylvain Soliman	On a Continuous Degree of Satisfaction of Temporal Logic Formulae with Applications to Systems Biology.	CMSB	2008	DBLP DOI BibTeX RDF
20	François Fages, Aurélien Rizk	On the Analysis of Numerical Data Time Series in Temporal Logic.	CMSB	2007	DBLP DOI BibTeX RDF
20	Burton W. Andrews, Pablo A. Iglesias	Rate Distortion Theory in Cellular Signaling.	CISS	2007	DBLP DOI BibTeX RDF
20	Andrew Phillips, Luca Cardelli, Giuseppe Castagna	A Graphical Representation for Biological Processes in the Stochastic pi-Calculus.	Trans. Comp. Sys. Biology	2006	DBLP DOI BibTeX RDF
20	Xiufen Zou, Yu Chen 0001, Zishu Pan	Modeling and Optimization of the Specificity in Cell Signaling Pathways Based on a High Performance Multi-objective Evolutionary Algorithm.	SEAL	2006	DBLP DOI BibTeX RDF
20	Hiroyuki Oka, Masanori Arita	Searching Similar Modules in Protein Interaction Netwo.	ICDE Workshops	2005	DBLP DOI BibTeX RDF
20	Nathalie Chabrier-Rivier, François Fages, Sylvain Soliman	The Biochemical Abstract Machine BIOCHAM.	CMSB	2004	DBLP DOI BibTeX RDF
20	Min Zhang, Guoqiang Li 0001, Yuxi Fu, Zhizhou Zhang 0003, Lin He 0007	Representation of the Signal Transduction with Aberrance Using Ipi Calculus.	CIS	2004	DBLP DOI BibTeX RDF