Search results for "Pathway"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
124	Harini N. Kasamsetty, Xiaogang Wu, Jake Yue Chen	Towards an integrative human pathway database for systems biology applications.	SAC	2008	DBLP DOI BibTeX RDF	bio-molecular pathway, signaling pathways, data integration
86	Tae-Sung Jung, Kyoung-Ran Kim, Seung-Hyun Jung, Tae-Kyung Kim, Myung-Sang Ahn, Jong-Hak Lee, Wan-Sup Cho	SPDBS: An SBML-Based Biochemical Pathway Database System.	ICIC (3)	2006	DBLP DOI BibTeX RDF
77	Shanhong Zheng, Chunguang Zhou, Guixia Liu	Signaling Pathway Reconstruction by Fusing Priori Knowledge.	ICIC (1)	2009	DBLP DOI BibTeX RDF	Pathway prediction, HMM model, Biochemical reaction information, Signaling transduction
77	PhuongAn Dam, Zhengchang Su, Victor Olman, Ying Xu 0001	In Silico Construction of the Carbon Fixation Pathway in Synechococcus sp. WH8102.	CSB	2004	DBLP DOI BibTeX RDF
75	Difeng Dong, Chun-Ying Cui, Benjamin Mow, Limsoon Wong	Deciphering Drug Action and Escape Pathways: An Example on Nasopharyngeal Carcinoma.	BICoB	2009	DBLP DOI BibTeX RDF	drug pathway, NPC, CYC202, gene expression
68	Shanhong Zheng, Chunguang Zhou, Yanwen Li, Guixia Liu	Research on Signaling Pathway Reconstruction Based on HMM.	ICYCS	2008	DBLP DOI BibTeX RDF
66	Matthew Eavenson, Maciej Janik, Shravya Nimmagadda, John A. Miller 0001, Krys J. Kochut, William S. York	GlycoBrowser: A Tool for Contextual Visualization of Biological Data and Pathways Using Ontologies.	ISBRA	2008	DBLP DOI BibTeX RDF	GlycoBrowser, pathway browsing, metabolic pathway exploration, glycomics, ontology, semantic web, transcriptomics
66	Dhivya Arasappan, Aurélien Mazurie, Joao Alves, Danail Bonchev, Gregory A. Buck	Path-a-Way: A Strategy for Network Analysis of Microarray Data.	BMEI (1)	2008	DBLP DOI BibTeX RDF	Pathway analysis, microarray, Network analysis, centrality, connectedness, statistical significance
65	Jindong Liu, Harry R. Erwin, Stefan Wermter, Mahmoud Elsaid	A Biologically Inspired Spiking Neural Network for Sound Localisation by the Inferior Colliculus.	ICANN (2)	2008	DBLP DOI BibTeX RDF
65	Yasuyuki Murai, Hisayuki Tatsumi, Nobuyuki Nagai, Masahiro Miyakawa	A Haptic Interface for an Indoor-Walk-Guide Simulator.	ICCHP	2006	DBLP DOI BibTeX RDF
59	Lily R. Liang, Vinay Mandal, Yi Lu, Deepak Kumar	Multi-dimensional Cluster Misclassification Test for Pathway Differential Analysis of Diabetes.	IMSCCS	2007	DBLP DOI BibTeX RDF	pathway analysis, multi- dimensional cluster misclassification, fuzzy
59	Jianlin Cheng, Lucas Scharenbroich, Pierre Baldi, Eric Mjolsness	Sigmoid: A Software Infrastructure for Pathway Bioinformatics and Systems Biology.	IEEE Intell. Syst.	2005	DBLP DOI BibTeX RDF	intelligent middleware, generative software, Sigmoid, Cellerator, UML, bioinformatics, systems biology, computer algebra, pathway, cell modeling
58	Eitan Yaffe, Dan Halperin	Approximating the pathway axis and the persistence diagram of a collection of balls in 3-space.	SCG	2008	DBLP DOI BibTeX RDF	alpha complex, persistence diagram, medial axis, molecular modeling
58	Carolyn L. Talcott	Symbolic modeling of signal transduction in pathway logic.	WSC	2006	DBLP DOI BibTeX RDF
58	Kwang-Hyun Cho, Sung-Young Shin, Hyeon-Woo Lee, Olaf Wolkenhauer	Simulation Study of the TNF alpha Mediated NF-kappa B Signaling Pathway.	CMSB	2003	DBLP DOI BibTeX RDF
56	Takeshi Arikuma, Sumi Yoshikawa, Kentaro Watanabe, Akihiko Konagaya	Ontology-Driven Hypothetic Assertion (OHA) for Drug Interaction Prediction.	IMSCCS	2007	DBLP DOI BibTeX RDF	Drug Interaction, Pharmacokinetics, Web Ontology Language (OWL), Biomedical Ontology, Metabolic Pathway
50	Daniel Glez-Peña, Rubén Domínguez, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola	Current Efforts to Integrate Biological Pathway Information.	IWANN (2)	2009	DBLP DOI BibTeX RDF	pathway integration, web-server application, biological interpretation, statistical analysis
50	Myungha Jang, Arang Rhie, Joyce Jiyoung Whang, Sanduk Yang, Hyun Seok Park	A statistical analysis of relation degree of compound pair on online biological pathway databases.	ICUIMC	2009	DBLP DOI BibTeX RDF	drawing algorithm, edge crossing, relation degree, XML, parsing, metabolic pathway
50	I. Barjis, Vijay Gehlot	Petri net based description and modeling of metabolic pathway.	SCSC	2007	DBLP BibTeX RDF	pentose phosphate pathway, simulation, modeling, Petri net
50	Jizhen Zhao, Dongsheng Che, Liming Cai	Comparative Pathway Prediction Via Unified Graph Modeling of Genomic Structure Information.	ISBRA	2007	DBLP DOI BibTeX RDF	Pathway prediction, protein-DNA interaction, operon, independent set, clique, tree decomposition
50	David Akers	CINCH: a cooperatively designed marking interface for 3D pathway selection.	UIST	2006	DBLP DOI BibTeX RDF	brain visualization, marking interfaces, pathway selection, gestures, pen-based interfaces, 3D selection
49	Denis Smirnov, Vivian G. Cheung	Disruption of a Transcriptional Regulatory Pathway Contributes to Phenotypes in Carriers of Ataxia Telangiectasia.	RECOMB	2008	DBLP DOI BibTeX RDF
49	Claudia Täubner, Till Merker	Discrete Modelling of the Ethylene-Pathway.	ICDE Workshops	2005	DBLP DOI BibTeX RDF
49	Bruce A. Draper, Kyungim Baek, Jeff Boody	Implementing the expert object recognition pathway.	Mach. Vis. Appl.	2004	DBLP DOI BibTeX RDF	Computer vision, Cognitive vision, Biological vision, Appearance-based vision
49	Fenglou Mao, Zhengchang Su, Victor Olman, David Chuang, Ying Xu 0001	Pathway Mapping with Operon Information: An Integer-Programming Method.	CSB	2004	DBLP DOI BibTeX RDF
49	Bruce A. Draper, Kyungim Baek, Jeff Boody	Implementing the Expert Object Recognition Pathway.	ICVS	2003	DBLP DOI BibTeX RDF
49	Kwang-Hyun Cho, Sung-Young Shin, Hyun Woo Kim, Olaf Wolkenhauer, Brian McFerran, Walter Kolch	Mathematical Modeling of the Influence of RKIP on the ERK Signaling Pathway.	CMSB	2003	DBLP DOI BibTeX RDF
48	Arvind K. Bansal, Christopher Woolverton	Applying Automatically Derived Gene-Groups to Automatically Predict and Refine Metabolic Pathways.	IEEE Trans. Knowl. Data Eng.	2003	DBLP DOI BibTeX RDF	enzymes, gene-groups, microbes, operons, orthologs, pathogenicity, Automation, homologs, drug-discovery, pathway, metabolic pathway, bacteria
47	Mahesh Visvanathan, Bernhard Pfeifer, Christian Baumgartner, Bernhard Tilg, Gerald H. Lushington	Integrative Approach for Combining TNFa-NFkB Mathematical Model to a Protein Interaction Connectivity Map.	ISBRA	2009	DBLP DOI BibTeX RDF	TNF? mediated NF-?B signaling pathway - protein-protein interaction and mathematical model
47	Jindong Liu, Harry R. Erwin, Stefan Wermter	Mobile robot broadband sound localisation using a biologically inspired spiking neural network.	IROS	2008	DBLP DOI BibTeX RDF
47	Karin D. Quiñones, Hua Su, Byron Marshall, Shauna Eggers, Hsinchun Chen	User-Centered Evaluation of Arizona BioPathway: An Information Extraction, Integration, and Visualization System.	IEEE Trans. Inf. Technol. Biomed.	2007	DBLP DOI BibTeX RDF
47	Tae-Sung Jung, Wan-Sup Cho	SPDBSW: A Service Prototype of SPDBS on the Web.	BNCOD	2007	DBLP DOI BibTeX RDF
47	Nattakarn Ratprasartporn, Ali Cakmak 0001, Gultekin Özsoyoglu	On Data and Visualization Models for Signaling Pathways.	SSDBM	2006	DBLP DOI BibTeX RDF
47	Hiroshi Mamitsuka, Yasushi Okuno, Atsuko Yamaguchi	Mining biologically active patterns in metabolic pathways using microarray expression profiles.	SIGKDD Explor.	2003	DBLP DOI BibTeX RDF	microarray profiles, Markov Models, model-based clustering, finite mixture models, metabolic pathways
40	Jian-Qin Liu, Tadashi Nakano	Quantitative Analysis of the Feedback of the Robust Signaling Pathway Network of Myosin V Molecular Motors on GluR1 of AMPA in Neurons: A Networking Approach for Controlling Nanobiomachines.	NanoNet	2009	DBLP DOI BibTeX RDF	Signaling Pathway Network, Nanobiomachine, Molecular Motor
40	Maria Knobelsdorf, Ralf Romeike	Creativity as a pathway to computer science.	ITiCSE	2008	DBLP DOI BibTeX RDF	CS, computer biographies, pedagogy, creativity, computers and society, CS education research, pathway, wider access
40	Carolyn L. Talcott	Pathway Logic.	SFM	2008	DBLP DOI BibTeX RDF	Symbolic systems biology, Pathway Logic, Epidermal Growth Factor signaling, rewriting logic, signal transduction
40	Sándor M. Szilágyi, László Szilágyi, Levente K. Görög, Constantin T. Luca, Dragos Cozma, Gabriel Ivanica, Zoltán Benyó	An Enhanced Accessory Pathway Localization Method for Efficient Treatment of Wolff-Parkinson-White Syndrome.	CIARP	2008	DBLP DOI BibTeX RDF	accessory pathway, Wolff-Parkinson-White syndrome, decision tree, sensitivity analysis
40	Shinn-Ying Ho, Chih-Hung Hsieh, Fu-Chieh Yu, Hui-Ling Huang	An Intelligent Two-Stage Evolutionary Algorithm for Dynamic Pathway Identification From Gene Expression Profiles.	IEEE ACM Trans. Comput. Biol. Bioinform.	2007	DBLP DOI BibTeX RDF	Orthogonal experimental design, Pathway identification, S-system model, Evolutionary algorithm, Divide-and-conquer, Genetic network
40	Byron Marshall, Karin D. Quiñones, Hua Su, Shauna Eggers, Hsinchun Chen	Visualizing aggregated biological pathway relations.	JCDL	2005	DBLP DOI BibTeX RDF	biological pathway relations, knowledge aggregation, visualization
40	Bing Liu 0013, P. S. Thiagarajan, David Hsu	Probabilistic Approximations of Signaling Pathway Dynamics.	CMSB	2009	DBLP DOI BibTeX RDF
40	Fei He 0002, Martin Brown, Lam Fat Yeung	On the complexity - sensitivity trade-off for the NF-kappaB pathway modeling.	IJCNN	2008	DBLP DOI BibTeX RDF
40	Fei He 0002, Martin Brown, Hong Yue, Lam Fat Yeung	Robust experimental design and feature selection in signal transduction pathway modeling.	IJCNN	2008	DBLP DOI BibTeX RDF
40	Songjian Lu, Fenghui Zhang, Jianer Chen, Sing-Hoi Sze	Finding Pathway Structures in Protein Interaction Networks.	Algorithmica	2007	DBLP DOI BibTeX RDF
40	Muffy Calder, Stephen Gilmore, Jane Hillston	Modelling the Influence of RKIP on the ERK Signalling Pathway Using the Stochastic Process Algebra PEPA.	Trans. Comp. Sys. Biology	2006	DBLP DOI BibTeX RDF
40	Jinling Zhang, Yinghua Lu, Lin Wang 0006, Hongxin Zhang, Bo Zhang, Yeqiu Wang, Kai Wu, Stefan Wölfl 0002	Uncentered (Absolute) Correlation Clustering Method Fit for Establishing Theoretical SAPK/JNK Signaling Pathway in Human Soft Tissue Sarcoma Samples.	IDEAL	2006	DBLP DOI BibTeX RDF
40	Greeshma Neglur, Robert L. Grossman, Natalia Maltsev, Clement T. Yu	Using Term Lists and Inverted Files to Improve Search Speed for Metabolic Pathway Databases.	DILS	2006	DBLP DOI BibTeX RDF
40	Wojtek Michalowski, Szymon Wilk, Anthony Thijssen, Mingmei Li	Bayesian Belief Network Model of the Radical Prostatectomy Pathway.	HICSS	2006	DBLP DOI BibTeX RDF
40	Zhike Zi, Zhirong Sun	Robustness Analysis of the IFN-y Induced JAK-STAT Signaling Pathway.	J. Comput. Sci. Technol.	2005	DBLP DOI BibTeX RDF	JAK-STAT, interferon gamma, robustness analysis
40	Eleftherios Panteris, Stephen Swift, Annette M. Payne, Xiaohui Liu 0001	Biochemical Pathway Analysis via Signature Mining.	CompLife	2005	DBLP DOI BibTeX RDF
38	Keyuan Jiang	An Object Model Based Repository for Biological Pathways Using XML Database Technology.	International Conference on Computational Science (2)	2007	DBLP DOI BibTeX RDF	Biological pathway datasets, BioPAX, XML datatype, XML database
38	Carolyn L. Talcott, David L. Dill	Multiple Representations of Biological Processes.	Trans. Comp. Sys. Biology	2006	DBLP DOI BibTeX RDF	biological process, Pathway Logic, Petri Net, Rewriting Logic, Signal transduction
38	Martin Farach-Colton, Yang Huang, John L. L. Woolford	Discovering temporal relations in molecular pathways using protein-protein interactions.	RECOMB	2004	DBLP DOI BibTeX RDF	molecular pathways, probe interval graphs, ribosomal assembly pathway, vertex ordering, interval graphs, protein-protein interaction
37	Qiong Cheng, Robert W. Harrison, Alexander Zelikovsky	Homomorphisms of Multisource Trees into Networks with Applications to Metabolic Pathways.	BIBE	2007	DBLP DOI BibTeX RDF
37	Purvesh Khatri, Sorin Draghici, Adi L. Tarca, Sonia S. Hassan, Roberto Romero	A System Biology Approach for the Steady-State Analysis of Gene Signaling Networks.	CIARP	2007	DBLP DOI BibTeX RDF
37	Cláudia Lemelle Fernandes, Diógenes Santiago Santos, Luiz Augusto Basso, Osmar Norberto de Souza	Structure Prediction and Docking Studies of Chorismate Synthase from Mycobacterium Tuberculosis.	BSB	2005	DBLP DOI BibTeX RDF
37	Naohiro Ishii, Masahiro Ozaki, Hiroshi Sasaki 0004	Correlation Computations for Movement Detection in Neural Networks.	KES	2004	DBLP DOI BibTeX RDF
35	Dina Angelika, Risa Etika, I Dewa Gede Ugrasena	Mechanism of necrotizing enterocolitis in preterm infants through the hypoxia signaling pathway, neuronal-glial signaling pathway, and intestinal fatty acid signaling pathway.	ICMHI	2022	DBLP DOI BibTeX RDF
35	Gundián M. de Hijas-Liste, Eva Balsa-Canto, Jan Ewald, Martin Bartl, Pu Li 0001, Julio R. Banga, Christoph Kaleta	Optimal programs of pathway control: dissecting the influence of pathway topology and feedback inhibition on pathway regulation.	BMC Bioinform.	2015	DBLP DOI BibTeX RDF
33	Merrill Knapp, Linda Briesemeister, Steven Eker, Patrick Lincoln, Andy Poggio, Carolyn L. Talcott, Keith Laderoute	Pathway Logic Helping Biologists Understand and Organize Pathway Information.	CSB Workshops	2005	DBLP DOI BibTeX RDF
31	Jyh-Jong Tsay, Bo-Liang Wu, Yu-Sen Jeng	Hierarchically Organized Layout for Visualization of Biochemical Pathway.	BMEI (1)	2008	DBLP DOI BibTeX RDF	Pathway Layout, Biochemical
30	Michele Baggi, Demis Ballis, Moreno Falaschi	Quantitative Pathway Logic for Computational Biology.	CMSB	2009	DBLP DOI BibTeX RDF
30	Yiannis Kanaris, Konstantinos Moutselos, Aristotelis Chatziioannou, Ilias Maglogiannis, Fragiskos N. Kolisis	Building in-silico pathway SBML models from heterogeneous sources.	BIBE	2008	DBLP DOI BibTeX RDF
30	Yu Wang 0035, Liguang Sun, Chunhui Xia, Liping Ye, Biao Wang	Caspase-8 Regulates Caspase-3 and Rb Respectively in Fas- and Actinomycin D-Mediated Apoptosis Pathway in Human Hepatoma Bel-7402 Cells.	BMEI (2)	2008	DBLP DOI BibTeX RDF
30	Zheng Rong Yang	Crosstalk and Signalling Pathway Complexity - A Case Study on Synthetic Models.	HAIS	2008	DBLP DOI BibTeX RDF	signalling pathways, gene expression order, Crosstalk, differential equations, transcription, degradation, steady-state analysis
30	Isao Hayashi, Hisashi Toyoshima, Takahiro Yamanoi	Recognition of perception and the localization for aperture problem in visual pathway of brain.	SMC	2007	DBLP DOI BibTeX RDF
30	Padhraig Gormley, Kang Li 0002, George W. Irwin	Modelling the MAPK Signalling Pathway Using a Two-Stage Identification Algorithm.	LSMS (2)	2007	DBLP DOI BibTeX RDF	MAPK, structure selection, orthogonal least squares, iterative subset selection, Systems biology, system identification, signal transduction
30	Joshua Wing Kei Ho, Tristan Manwaring, Seok-Hee Hong 0001, Uwe Röhm, David Cho Yau Fung, Kai Xu 0003, Tim Kraska, David Hart	PathBank: Web-Based Querying and Visualziation of an Integrated Biological Pathway Database.	CGIV	2006	DBLP DOI BibTeX RDF
30	David Akers	Wizard of Oz for participatory design: inventing a gestural interface for 3D selection of neural pathway estimates.	CHI Extended Abstracts	2006	DBLP DOI BibTeX RDF	Wizard of Oz prototyping, brain visualization, participatory design, gestural interfaces, 3D selection
30	Karsten Ehrig, Reiko Heckel, Georgios Lajios	Molecular Analysis of Metabolic Pathway with Graph Transformation.	ICGT	2006	DBLP DOI BibTeX RDF
30	Jeerayut Chaijaruwanich, Jamlong Khamphachua, Sukon Prasitwattanaseree, Saradee Warit, Prasit Palittapongarnpim	Application of Factor Analysis on Mycobacterium Tuberculosis Transcriptional Responses for Drug Clustering, Drug Target, and Pathway Detections.	ADMA	2006	DBLP DOI BibTeX RDF
30	Henry D. I. Abarbanel, Leif Gibb, Gabriel B. Mindlin, Mikhail I. Rabinovich, Sachin S. Talathi	Spike timing and synaptic plasticity in the premotor pathway of birdsong.	Biol. Cybern.	2004	DBLP DOI BibTeX RDF
30	Zhengchang Su, PhuongAn Dam, X. Chen, Victor Olman, Tao Jiang 0001, Ying Xu 0001	Computational Construction of Nitrogen Assimilation Pathway in Cyanobacteria Synechococcus sp. WH8102.	CSB	2004	DBLP DOI BibTeX RDF
29	Min A. Jhun, Taesung Park	Clustering Method to Identify Gene Sets with Similar Expression Profiles in Adjacent Chromosomal Regions.	IWANN (1)	2009	DBLP DOI BibTeX RDF	chromosomal location, clustering, microarray, pathway
29	Alex H. Leo, Gang Sun	Cellular Computational Model of Biology.	World Congress on Engineering (Selected Papers)	2008	DBLP DOI BibTeX RDF	Cellular Computational model, Lac operon, E. coli, metabolic pathway
29	Ranjit Randhawa, Clifford A. Shaffer, John J. Tyson	Fusing and composing macromolecular regulatory network models.	SpringSim (2)	2007	DBLP BibTeX RDF	pathway models, computational biology, systems biology markup language (SBML)
29	Liliana Félix, Francesc Rosselló, Gabriel Valiente	Reconstructing Metabolic Pathways by Bidirectional Chemical Search.	CMSB	2007	DBLP DOI BibTeX RDF	biochemical reaction, metabolic pathway, Artificial chemistry
29	Seung-Hyun Jung, Tae-Sung Jung, Tae-Kyung Kim, Kyoung-Ran Kim, Jae-Soo Yoo, Wan-Sup Cho	An Efficient Storage Model for the SBML Documents Using Object Databases.	VDMB	2006	DBLP DOI BibTeX RDF	Ontology, Bioinformatics, System Biology, Object Database, Pathway, SBML
29	Stephen J. Hartley	An Analysis of Some Problems in Managing Virtual Memory Systems with Fast Secondary Storage Devices.	IEEE Trans. Software Eng.	1988	DBLP DOI BibTeX RDF	cyclic locality interval, least-cost pathway, loop structure, space-time execution cost, memory management, storage management, virtual memory, storage allocation, storage allocation, virtual storage, secondary storage
28	Leonidas G. Alexopoulos, Douglas A. Lauffenburger, Peter K. Sorger	Modeling pro-death signaling pathways in cancer hepatocytes using multi-combinatorial treatments of inhibitors and stimuli.	BIBE	2008	DBLP DOI BibTeX RDF
28	Anil Aswani, Claire J. Tomlin	Topology based control of biological genetic networks.	CDC	2008	DBLP DOI BibTeX RDF
28	Akiyuki Iwasaki, Tadasuke Nozoe, Takashi Kawauchi, Masahiro Okamoto	Design of Bio-inspired Fault-tolerant Adaptive Routing Based on Enzymatic Feedback Control in the Cell: Towards Averaging Load Balance in the Network.	FBIT	2007	DBLP DOI BibTeX RDF
28	Ali Cakmak 0001, Mustafa Kirac, Marc R. Reynolds, Z. Meral Özsoyoglu, Gultekin Özsoyoglu	Gene Ontology-Based Annotation Analysis and Categorization of Metabolic Pathways.	SSDBM	2007	DBLP DOI BibTeX RDF
28	Eris Chinellato, Angel P. del Pobil	Vision and Grasping: Humans vs. Robots.	IWINAC (1)	2005	DBLP DOI BibTeX RDF
28	Marita Muscholl	Integrated Clinical Pathways in Health Information Systems - An Architectural Concept.	Wissensmanagement (LNCS Volume)	2005	DBLP DOI BibTeX RDF
28	Ugur Dogrusöz, Erhan Giral, Ahmet Cetintas, Ali Civril, Emek Demir	A Compound Graph Layout Algorithm for Biological Pathways.	GD	2004	DBLP DOI BibTeX RDF
28	Jian-Qin Liu, Katsunori Shimohara	On Scalable Biomolecular Computers Based on Crosstalked Phosphorylation and Dephosphorylation Pathways Regulated by Rho Family GTPases of Cells.	ICMENS	2004	DBLP DOI BibTeX RDF	Nanobiomachine, signaling pathways of living cells, Rho family GTPase, biomolecular computer
23	Kim Philipp Jablonski, Niko Beerenwinkel	Coherent pathway enrichment estimation by modeling inter-pathway dependencies using regularized regression.	Bioinform.	2023	DBLP DOI BibTeX RDF
23	Yue Huang, Ying Zhang, Qi Zhou, Yueqiu Teng, Meijuan Sui, Fan Zhang	Combined immune and DDR pathway classifier: A novel pathway-based classification aimed at tailoring personalized therapies for acute myeloid leukemia patients.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
23	Xingyi Li, Xuequn Shang, Zhelin Zhao, Chenzhuo Yan	A personalized pathway activation inference method based on pathway structure for classification of inflammatory bowel disease.	BIBM	2023	DBLP DOI BibTeX RDF
23	Kazuyuki Kaneda, Kengo Itou	Pathway Width Estimation Method using Images and Pathway Information Provision Method for Wheelchair Users.	GCCE	2023	DBLP DOI BibTeX RDF
23	Peter D. Karp, Suzanne M. Paley, Markus Krummenacker, Anamika Kothari, Michael J. Wannemuehler, Gregory J. Phillips	Pathway Tools Management of Pathway/Genome Data for Microbial Communities.	Frontiers Bioinform.	2022	DBLP DOI BibTeX RDF
23	Yue Zhao, Dong-Guk Shin	Deep Pathway Analysis V2.0: A Pathway Analysis Framework Incorporating Multi-Dimensional Omics Data.	IEEE ACM Trans. Comput. Biol. Bioinform.	2021	DBLP DOI BibTeX RDF
23	Jiye Wang, Zengrui Wu, Yayuan Peng, Weihua Li 0005, Guixia Liu, Yun Tang 0001	Pathway-Based Drug Repurposing with DPNetinfer: A Method to Predict Drug-Pathway Associations via Network-Based Approaches.	J. Chem. Inf. Model.	2021	DBLP DOI BibTeX RDF
23	Peter D. Karp, Peter E. Midford, Richard Billington, Anamika Kothari, Markus Krummenacker, Mario Latendresse, Wai Kit Ong, Pallavi Subhraveti, Ron Caspi, Carol A. Fulcher, Ingrid M. Keseler, Suzanne M. Paley	Pathway Tools version 23.0 update: software for pathway/genome informatics and systems biology.	Briefings Bioinform.	2021	DBLP DOI BibTeX RDF
23	Feifei Guo, Chunhong Jiang, Yujie Xi, Dan Wang, Yi Zhang, Ning Xie, Yi Guan, Fangbo Zhang, Hongjun Yang	Investigation of pharmacological mechanism of natural product using pathway fingerprints similarity based on "drug-target-pathway" heterogenous network.	J. Cheminformatics	2021	DBLP DOI BibTeX RDF
23	Alima Zhang, Chaorui Liu, Guoliang Lin	P53 Pathway Activate Detection based on Machine Learning: The modified XGBoost-based method of pan-cancer pathway activity detection in the Cancer Genome Atlas.	CCEAI	2021	DBLP DOI BibTeX RDF
23	Igor V. Rodchenkov, Ozgun Babur, Augustin Luna, Bülent Arman Aksoy, Jeffrey V. Wong, Dylan Fong, Max Franz, Metin Can Siper, Manfred Cheung, Michael Wrana, Harsh Mistry, Logan Mosier, Jonah Dlin, Qizhi Wen, Caitlin O'Callaghan, Wanxin Li, Geoffrey Elder, Peter T. Smith, Christian Dallago, Ethan Cerami, Benjamin Gross, Ugur Dogrusoz, Emek Demir, Gary D. Bader, Chris Sander	Pathway Commons 2019 Update: integration, analysis and exploration of pathway data.	Nucleic Acids Res.	2020	DBLP DOI BibTeX RDF
23	Abdur Rahman Mohd Abul Basher, Ryan J. McLaughlin, Steven J. Hallam	Metabolic pathway inference using multi-label classification with rich pathway features.	PLoS Comput. Biol.	2020	DBLP DOI BibTeX RDF
23	Lucy Lu Wang, G. Thomas Hayman, Jennifer R. Smith, Monika Tutaj, Mary Shimoyama, John H. Gennari	Predicting instances of pathway ontology classes for pathway integration.	J. Biomed. Semant.	2019	DBLP DOI BibTeX RDF