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Publication years (Num. hits)
1994-2005 (22) 2006-2007 (21) 2008-2009 (21) 2010-2011 (20) 2012-2013 (17) 2014 (17) 2015-2016 (19) 2017-2019 (32) 2020-2021 (46) 2022 (18) 2023 (30) 2024 (2)
Publication types (Num. hits)
article(174) incollection(3) inproceedings(84) phdthesis(4)
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Found 265 publication records. Showing 265 according to the selection in the facets
Hits ? Authors Title Venue Year Link Author keywords
97Alessandro Sette, Huynh-Hoa Bui, John Sidney, Philip E. Bourne, Søren Buus, Ward Fleri, R. Kubo, Ole Lund, D. Nemazee, Julia V. Ponomarenko, Muthu Sathiamurthy, Scott Stewart, Scott Way, Stephen S. Wilson, Björn Peters The Immune Epitope Database and Analysis Resource. Search on Bibsonomy PRIB The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
86Simon M. Garrett A Paratope Is Not an Epitope: Implications for Immune Network Models and Clonal Selection. Search on Bibsonomy ICARIS The full citation details ... 2003 DBLP  DOI  BibTeX  RDF Paratope, epitope, critical evaluation, Clonal Selection (CS), Immune Network Models, Artificial Immune Systems (AIS)
78Brendan Mumey, Nathaniel Ohler, Thomas Angel, Algirdas J. Jesaitis, Edward A. Dratz Filtering Epitope Alignments to Improve Protein Surface Prediction. Search on Bibsonomy ISPA Workshops The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
78Dokyun Na, Doheon Lee Mathematical Modeling of Immune Suppression. Search on Bibsonomy ICARIS The full citation details ... 2005 DBLP  DOI  BibTeX  RDF
66Margaret Dah-Tsyr Chang, Hao-Teng Chang, Rong-Yuan Huang, Wen-Shyong Tzou, Chih-Hong Liu, Wei-Jun Zhung, Hsien-Wei Wang, Chun-Tien Chang, Tun-Wen Pai A Database for Prediction of Unique Peptide Motifs as Linear Epitopes. Search on Bibsonomy ISBRA The full citation details ... 2007 DBLP  DOI  BibTeX  RDF unique peptide motif, linear epitope, antigenicity, protein family, specificity
58Brendan Mumey, Brian W. Bailey, Edward A. Dratz Revealing protein structures: a new method for mapping antibody epitopes. Search on Bibsonomy RECOMB The full citation details ... 2002 DBLP  DOI  BibTeX  RDF
47Dennis Maletich Junqueira, Rúbia Marília de Medeiros, Sabrina Esteves de Matos Almeida, Vanessa Rodrigues Paixão-Cortez, Paulo Michel Roehe, Fernando Rosado Spilki Mapping HIV-1 Subtype C gp120Epitopes Using a Bioinformatic Approach. Search on Bibsonomy BSB The full citation details ... 2009 DBLP  DOI  BibTeX  RDF HIV-1, subtype C, epitope, gp120, bioinformatics, HLA
39Refat Sharmin, Abul Bashar Mir Md Khademul Islam A highly conserved WDYPKCDRA epitope in the RNA directed RNA polymerase of human coronaviruses can be used as epitope-based universal vaccine design. Search on Bibsonomy BMC Bioinform. The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
39Zeynep Kosaloglu-Yalçin, Inka Zoernig, Niels Halama, Eliana Ruggiero, Benedikt Brors, Dirk Jäger The epitope landscape of CRC liver metastases analyzed by whole-exome sequencing and in silico epitope prediction. Search on Bibsonomy BCB The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
39Sharat Chandra, Tiratha Raj Singh Linear B cell epitope prediction for epitope vaccine design against meningococcal disease and their computational validations through physicochemical properties. Search on Bibsonomy Netw. Model. Anal. Health Informatics Bioinform. The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
39Huynh-Hoa Bui, John Sidney, Wei Li, Nicholas Fusseder, Alessandro Sette Development of an epitope conservancy analysis tool to facilitate the design of epitope-based diagnostics and vaccines. Search on Bibsonomy BMC Bioinform. The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
39Chibing Gong, Yan Li, Ming Li, Jun Luo, Hong Cao, Min Long B-cell Epitope Mapping of Helicobacter pylori Neutrophil-Activating Protein. Search on Bibsonomy FBIT The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
39David Heckerman, Carl Myers Kadie, Jennifer Listgarten Leveraging Information Across HLA Alleles/Supertypes Improves Epitope Prediction. Search on Bibsonomy RECOMB The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
39Claus Lundegaard, Morten Nielsen 0001, Kasper Lamberth, Peder Worning, Christina Sylvester-Hvid, Søren Buus, Søren Brunak, Ole Lund MHC Class I Epitope Binding Prediction Trained on Small Data Sets. Search on Bibsonomy ICARIS The full citation details ... 2004 DBLP  DOI  BibTeX  RDF
39Liliana Florea, Bjarni V. Halldórsson, Oliver Kohlbacher, Russell Schwartz, Stephen Hoffman, Sorin Istrail Epitope Prediction Algorithms for Peptide based Vaccine Design. Search on Bibsonomy CSB The full citation details ... 2003 DBLP  DOI  BibTeX  RDF
39Noah Zaitlen, Manuel Reyes-Gomez, David Heckerman, Nebojsa Jojic Shift-Invariant Adaptive Double Threading: Learning MHC II - Peptide Binding. Search on Bibsonomy RECOMB The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
39David C. Trudgian, Felicia Charles Johnson, Zheng Rong Yang Predicting HIV-1 T Cell Epitopes Using Bio-basis Function Neural Networks. Search on Bibsonomy IJCNN The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
39Heather J. Ruskin, John Burns 0001 Network Emergence in Immune System Shape Space. Search on Bibsonomy ICCSA (2) The full citation details ... 2005 DBLP  DOI  BibTeX  RDF
27Bernhard Knapp, Ulrich Omasits, Sophie Frantal, Wolfgang Schreiner A critical cross-validation of high throughput structural binding prediction methods for pMHC. Search on Bibsonomy J. Comput. Aided Mol. Des. The full citation details ... 2009 DBLP  DOI  BibTeX  RDF T cell epitope prediction, Threading, Energy minimization, Substitution, Scoring
27Peng Zhou 0003, Xiang Chen, Zhicai Shang Side-chain conformational space analysis (SCSA): A multi conformation-based QSAR approach for modeling and prediction of protein-peptide binding affinities. Search on Bibsonomy J. Comput. Aided Mol. Des. The full citation details ... 2009 DBLP  DOI  BibTeX  RDF Multi-conformation-based quantitative structure-activity relationship, Side-chain conformational space analysis, Rotamer library, Self-consistent mean field theory, Protein-peptide complex, HLA-A*0201-restricted CTL epitope
27T. C. Ip, Vincent A. Fischetti, Jeanette P. Schmidt An Algorithm for Identifying Similar Amino Acid Clusters among Different Alpha-Helical Coiled-Coil Proteins Using Their Secondary Structure. Search on Bibsonomy Algorithmica The full citation details ... 1999 DBLP  DOI  BibTeX  RDF Coiled-coil, Epitope, Dynamic programming, Computational biology, Protein structure
20Étienne Goffinet, Raghvendra Mall, Ankita Singh, Rahul Kaushik, Filippo Castiglione MATE-Pred: Multimodal Attention-based TCR-Epitope interaction Predictor. Search on Bibsonomy CoRR The full citation details ... 2024 DBLP  DOI  BibTeX  RDF
20Muhammad Shahab, Muhammad Waleed Iqbal, Abbas Ahmad, Fahad M. Alshabrmi, Dong-Qing Wei, Abbas Khan, Guojun Zheng Immunoinformatics-driven In silico vaccine design for Nipah virus (NPV): Integrating machine learning and computational epitope prediction. Search on Bibsonomy Comput. Biol. Medicine The full citation details ... 2024 DBLP  DOI  BibTeX  RDF
20Chhaya Singh, Neeru Adlakha, Kamal Raj Pardasani Fuzzy Deep Learning Model for Prediction of Conformational Epitope. Search on Bibsonomy SN Comput. Sci. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Ivan Jacobs, Lim Chwee Ming, Jamie Mong, Manolis Maragoudakis, Nishant Malik In silico antibody-peptide epitope prediction for personalized cancer therapy. Search on Bibsonomy Frontiers Appl. Math. Stat. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Ran Liu, Ye-Fan Hu, Jin Du, Bao-Zhong Zhang, Thomas Yau, Xiaodan Fan, Jian-Dong Huang Family-Specific Training Improves Linear B Cell Epitope Prediction for Emerging Viruses. Search on Bibsonomy IEEE ACM Trans. Comput. Biol. Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Hamid Motamedi, Marzie Mahdizade Ari, Mohsen Shahlaei, Sajad Moradi, Parisa Farhadikia, Amirhoushang Alvandi, Ramin Abiri Designing multi-epitope vaccine against important colorectal cancer (CRC) associated pathogens based on immunoinformatics approach. Search on Bibsonomy BMC Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Babak Beikzadeh Immunoinformatics design of multi-epitope vaccine using OmpA, OmpD and enterotoxin against non-typhoidal salmonellosis. Search on Bibsonomy BMC Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Anand K. Keshri, Rimanpreet Kaur, Suraj S. Rawat, Naina Arora, Rajan K. Pandey, Bajarang V. Kumbhar, Amit Mishra, Shweta Tripathi, Amit Prasad Designing and development of multi-epitope chimeric vaccine against Helicobacter pylori by exploring its entire immunogenic epitopes: an immunoinformatic approach. Search on Bibsonomy BMC Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Mona Shafaghi, Zohreh Bahadori, Hamid Madanchi, Mohammad Mehdi Ranjbar, Ali Akbar Shabani, Seyed Fazlollah Mousavi Immunoinformatics-aided design of a new multi-epitope vaccine adjuvanted with domain 4 of pneumolysin against Streptococcus pneumoniae strains. Search on Bibsonomy BMC Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Bruna Moreira da Silva, David B. Ascher, Douglas E. V. Pires epitope1D: accurate taxonomy-aware B-cell linear epitope prediction. Search on Bibsonomy Briefings Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Gabriel Cia, Fabrizio Pucci, Marianne Rooman Critical review of conformational B-cell epitope prediction methods. Search on Bibsonomy Briefings Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Yuepeng Jiang, Miaozhe Huo, Shuai Cheng Li TEINet: a deep learning framework for prediction of TCR-epitope binding specificity. Search on Bibsonomy Briefings Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Juntao Deng, Xiao Zhou, Pengyan Zhang, Weibin Cheng, Min Liu 0013, Junzhang Tian IEPAPI: a method for immune epitope prediction by incorporating antigen presentation and immunogenicity. Search on Bibsonomy Briefings Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Jeremie Theddy Darmawan, Jenq-Shiou Leu, Cries Avian, Nanda Rizqia Pradana Ratnasari MITNet: a fusion transformer and convolutional neural network architecture approach for T-cell epitope prediction. Search on Bibsonomy Briefings Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Zeynep Kosaloglu-Yalçin, Nina Blazeska, Randi Vita, Hannah Carter, Morten Nielsen 0001, Stephen Schoenberger, Alessandro Sette, Bjoern Peters The Cancer Epitope Database and Analysis Resource (CEDAR). Search on Bibsonomy Nucleic Acids Res. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Tianyi Qiu, Lu Zhang, Zikun Chen, Yuan Wang, Tiantian Mao, Caicui Wang, Yewei Cun, Genhui Zheng, Deyu Yan, Mengdi Zhou, Kailin Tang, Zhiwei Cao SEPPA-mAb: spatial epitope prediction of protein antigens for mAbs. Search on Bibsonomy Nucleic Acids Res. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Abdul Rehman Khan, Marcel J. T. Reinders, Indu Khatri Determining epitope specificity of T-cell receptors with transformers. Search on Bibsonomy Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Ceder Dens, Kris Laukens, Wout Bittremieux, Pieter Meysman The pitfalls of negative data bias for the T-cell epitope specificity challenge. Search on Bibsonomy Nat. Mac. Intell. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Benjamin Alexander Albert, Yunxiao Yang, Xiaoshan M. Shao, Dipika Singh, Kellie N. Smith, Valsamo Anagnostou, Rachel Karchin Deep neural networks predict class I major histocompatibility complex epitope presentation and transfer learn neoepitope immunogenicity. Search on Bibsonomy Nat. Mac. Intell. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Yicheng Gao, Yuli Gao, Kejing Dong, Siqi Wu, Qi Liu 0019 Reply to: The pitfalls of negative data bias for the T-cell epitope specificity challenge. Search on Bibsonomy Nat. Mac. Intell. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Xiao Yuan BeeTLe: A Framework for Linear B-Cell Epitope Prediction and Classification. Search on Bibsonomy CoRR The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Marco Pegoraro 0002, Clémentine Dominé, Emanuele Rodolà, Petar Velickovic, Andreea Deac Geometric Epitope and Paratope Prediction. Search on Bibsonomy CoRR The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Pengfei Zhang, Seo-Jin Bang, Heewook Lee Active Learning Framework for Cost-Effective TCR-Epitope Binding Affinity Prediction. Search on Bibsonomy CoRR The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Safoura Soleymani, Fatemeh Janati-fard, Mohammad Reza Housaindokht Designing a bioadjuvant candidate vaccine targeting infectious bursal disease virus (IBDV) using viral VP2 fusion and chicken IL-2 antigenic epitope: A bioinformatics approach. Search on Bibsonomy Comput. Biol. Medicine The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Rawaa AlChalabi, Aya Al-Rahim, Dania Omer, Ahmed AbdulJabbar Suleiman Immunoinformatics design of multi-epitope peptide-based vaccine against Haemophilus influenzae strain using cell division protein. Search on Bibsonomy Netw. Model. Anal. Health Informatics Bioinform. The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Xiao Yuan BeeTLe: A Framework for Linear B-Cell Epitope Prediction and Classification. Search on Bibsonomy ECML/PKDD (6) The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Pengfei Zhang, Seo-Jin Bang, Heewook Lee Active Learning Framework for Cost-Effective TCR-Epitope Binding Affinity Prediction. Search on Bibsonomy BIBM The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Jodie Ashford, Anikó Ekárt, Felipe Campelo Estimating the Limits of Organism-Specific Training for Epitope Prediction. Search on Bibsonomy BIBM The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Avik Bhattacharya, James O. Wrabl, Samuel J. Landry, Ramgopal R. Mettu Parallel Computation of Conformational Stability for CD4+ T-cell Epitope Prediction. Search on Bibsonomy BIBM The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Zhang Wan, Zhuoyi Lin, Shamima Rashid, Shaun Yue-Hao Ng, Rui Yin 0002, J. Senthilnath 0001, Chee Keong Kwoh 0001 PESI: Paratope-Epitope Set Interaction for SARS-CoV-2 Neutralization Prediction. Search on Bibsonomy BIBM The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Ryan Gardner, Joshua Wilkins, Sejal Mistry, Ramkiran Gouripeddi, Julio C. Facelli Structural Homology of Epitope Binding Mimicry in the Onset of Type 1 Diabetes Mellitus. Search on Bibsonomy BIBM The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Salvador Eugenio C. Caoili Capturing Solvent-System Effects in B-Cell Epitope Prediction with the HAPTIC3/HEPTAD2 User Toolkit (HUT2). Search on Bibsonomy BCB The full citation details ... 2023 DBLP  DOI  BibTeX  RDF
20Jingshu Bi, Yuanjie Zheng, Chongjing Wang, Yanhui Ding An Attention Based Bidirectional LSTM Method to Predict the Binding of TCR and Epitope. Search on Bibsonomy IEEE ACM Trans. Comput. Biol. Bioinform. The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Samira Sanami, Mahmoud Rafieian-Kopaei, Korosh Ashrafi Dehkordi, Hamidreza Pazoki-Toroudi, Fatemeh Azadegan-Dehkordi, Gholam-Reza Mobini, Morteza Alizadeh, Muhammad Sadeqi Nezhad, Maryam Ghasemi-Dehnoo, Nader Bagheri In silico design of a multi-epitope vaccine against HPV16/18. Search on Bibsonomy BMC Bioinform. The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Subhadip Saha, Shubham Vashishtha, Bishwajit Kundu, Monidipa Ghosh In-silico design of an immunoinformatics based multi-epitope vaccine against Leishmania donovani. Search on Bibsonomy BMC Bioinform. The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Bruna Moreira da Silva, Yoochan Myung, David B. Ascher, Douglas E. V. Pires epitope3D: a machine learning method for conformational B-cell epitope prediction. Search on Bibsonomy Briefings Bioinform. The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Zeynep Banu Ozger, Pinar Cihan A novel ensemble fuzzy classification model in SARS-CoV-2 B-cell epitope identification for development of protein-based vaccine. Search on Bibsonomy Appl. Soft Comput. The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Thaís Cristina Vilela Rodrigues, Arun Kumar Jaiswal, Marcela Rezende Lemes, Marcos Vinícius da Silva, Helioswilton Sales-Campos, Luiz Carlos Júnior Alcântara, Sthephane Fraga de Oliveira Tosta, Rodrigo Bentes Kato, Khalid J. Alzahrani, Debmalya Barh, Vasco Ariston de Carvalho Azevedo, Sandeep Tiwari, Siomar de Castro Soares An immunoinformatics-based designed multi-epitope candidate vaccine (mpme-VAC/STV-1) against Mycoplasma pneumoniae. Search on Bibsonomy Comput. Biol. Medicine The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Muhammad Suleman, Uzair Asad, Shafia Arshad, Ayaz ur Rahman, Fazal Akbar, Haji Khan, Zahid Hussain, Syed Shujait Ali, Anwar Mohammad, Abbas Khan, Liaqat Ali, Dong-Qing Wei Screening of immune epitope in the proteome of the Dabie bandavirus, SFTS, to design a protein-specific and proteome-wide vaccine for immune response instigation using an immunoinformatics approaches. Search on Bibsonomy Comput. Biol. Medicine The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Yiqi Wang, Haomiao Tang, Chuang Gao, Meixin Ge, Ziteng Li, Zhiqiang Dong, Liang Zhao Flexibility-aware graph model for accurate epitope identification. Search on Bibsonomy Comput. Biol. Medicine The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Fatima Noor, Sajjad Ahmad, Maryam Saleem, Huda Alshaya, Muhammad Qasim, Abdur Rehman, Hamsa Ehsan, Nimra Talib, Hamza Saleem, Yousef A. Bin Jardan, Sidra Aslam Designing a multi-epitope vaccine against Chlamydia pneumoniae by integrating the core proteomics, subtractive proteomics and reverse vaccinology-based immunoinformatics approaches. Search on Bibsonomy Comput. Biol. Medicine The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Anthony F. La Marca, Robson da S. Lopes, Anna Diva P. Lotufo, Daniella C. Bartholomeu, Carlos R. Minussi BepFAMN: A Method for Linear B-Cell Epitope Predictions Based on Fuzzy-ARTMAP Artificial Neural Network. Search on Bibsonomy Sensors The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Marion F. S. Fischer, James E. Crowe Jr., Jens Meiler Computational epitope mapping of class I fusion proteins using low complexity supervised learning methods. Search on Bibsonomy PLoS Comput. Biol. The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Amit Joshi, Nillohit Mitra Ray, Joginder Singh, Atul Kumar Upadhyay, Vikas Kaushik T-cell epitope-based vaccine designing against Orthohantavirus: a causative agent of deadly cardio-pulmonary disease. Search on Bibsonomy Netw. Model. Anal. Health Informatics Bioinform. The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Youjin Kim, Jinhee Park, Junseok Kwon B-Cell Linear Epitope Prediction Using Transformer Encoder. Search on Bibsonomy ICTC The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Yan Liu, Zheng Liu Identification of linear epitope with Multiple Sequence Representation Learning Network. Search on Bibsonomy BIBM The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Rawshon Raha, Yulian Ding, Qiang Liu, Fang-Xiang Wu Unseen Epitope-TCR Interaction Prediction based on Amino Acid Physicochemical Properties. Search on Bibsonomy BIBM The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Avik Bhattacharya, Molly C. Lyons, Samuel J. Landry, Ramgopal R. Mettu Incorporating antigen processing into CD4+ T cell epitope prediction with integer linear programming. Search on Bibsonomy BCB The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Salvador Eugenio C. Caoili B-cell epitope prediction for antipeptide paratopes with the HAPTIC2/HEPTAD user toolkit (HUT). Search on Bibsonomy BCB The full citation details ... 2022 DBLP  DOI  BibTeX  RDF
20Akash Bahai Computational methods for characterizing viral neutralization data and predicting linear B-cell epitopes (Computergestützte Methoden zur Charakterisierung viraler Neutralisierungsdaten und Vorhersage linearer B-Zell-Epitope) (PDF / PS) Search on Bibsonomy 2022   DOI  RDF
20Toshiaki Noumi, Seiichi Inoue, Haruka Fujita, Kugatsu Sadamitsu, Makoto Sakaguchi, Akiko Tenma, Hironori Nakagami Epitope Prediction of Antigen Protein Using Attention-based LSTM Network. Search on Bibsonomy J. Inf. Process. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Atefeh Ghasemnejad, Samira Bazmara, Mahsa Shadmani, Kamran Pooshang Bagheri Designing a New Multi-Epitope Pertussis Vaccine with Highly Population Coverage Based on a Novel Sequence and Structural Filtration Algorithm. Search on Bibsonomy IEEE ACM Trans. Comput. Biol. Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Matin Fathollahi, Anwar Fathollahi, Hamid Motamedi, Jale Moradi, Amirhooshang Alvandi, Ramin Abiri In silico vaccine design and epitope mapping of New Delhi metallo-beta-lactamase (NDM): an immunoinformatics approach. Search on Bibsonomy BMC Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Avisa Maleki, Giulia Russo, Giuseppe Alessandro Parasiliti Palumbo, Francesco Pappalardo 0001 In silico design of recombinant multi-epitope vaccine against influenza A virus. Search on Bibsonomy BMC Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Xiaoyun Yang, Liyuan Zhao, Fang Wei, Jing Li 0107 DeepNetBim: deep learning model for predicting HLA-epitope interactions based on network analysis by harnessing binding and immunogenicity information. Search on Bibsonomy BMC Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Sangeeta Khare, Marli Azevedo, Pravin Parajuli, Kuppan Gokulan Conformational Changes of the Receptor Binding Domain of SARS-CoV-2 Spike Protein and Prediction of a B-Cell Antigenic Epitope Using Structural Data. Search on Bibsonomy Frontiers Artif. Intell. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Alice Triveri, Stefano A. Serapian, Filippo Marchetti, Filippo Doria, Silvia Pavoni, Fabrizio Cinquini, Elisabetta Moroni, Andrea Rasola, Francesco Frigerio, Giorgio Colombo 0001 SARS-CoV-2 Spike Protein Mutations and Escape from Antibodies: A Computational Model of Epitope Loss in Variants of Concern. Search on Bibsonomy J. Chem. Inf. Model. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Pieter Moris, Joey De Pauw, Anna Postovskaya, Sofie Gielis, Nicolas De Neuter, Wout Bittremieux, Benson Ogunjimi, Kris Laukens, Pieter Meysman Current challenges for unseen-epitope TCR interaction prediction and a new perspective derived from image classification. Search on Bibsonomy Briefings Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Aftab Alam, Arbaaz Khan, Nikhat Imam, Mohd Faizan Siddiqui, Mohd Waseem, Md. Zubbair Malik, Romana Ishrat Design of an epitope-based peptide vaccine against the SARS-CoV-2: a vaccine-informatics approach. Search on Bibsonomy Briefings Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Akash Bahai, Ehsaneddin Asgari, Mohammad R. K. Mofrad, Andreas Kloetgen, Alice C. McHardy EpitopeVec: linear epitope prediction using deep protein sequence embeddings. Search on Bibsonomy Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Maria Suprun, Randall J. Ellis, Hugh A. Sampson, Mayte Suárez-Fariñas bbeaR: an R package and framework for epitope-specific antibody profiling. Search on Bibsonomy Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Maximilian Collatz, Florian Mock, Emanuel Barth, Martin Hölzer, Konrad Sachse, Manja Marz EpiDope: a deep neural network for linear B-cell epitope prediction. Search on Bibsonomy Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Maximilian Collatz, Florian Mock, Emanuel Barth, Martin Hölzer, Konrad Sachse, Manja Marz EpiDope: a deep neural network for linear B-cell epitope prediction. Search on Bibsonomy Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Jodie Ashford, João Reis-Cunha, Igor Lobo, Francisco Pereira Lobo, Felipe Campelo Organism-specific training improves performance of linear B-cell epitope prediction. Search on Bibsonomy Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Bhargab Ghoshal, Biraja Ghoshal, Stephen Swift, Allan Tucker Uncertainty Estimation in SARS-CoV-2 B-cell Epitope Prediction for Vaccine Development. Search on Bibsonomy CoRR The full citation details ... 2021 DBLP  BibTeX  RDF
20Alice Del Vecchio, Andreea Deac, Pietro Liò, Petar Velickovic Neural message passing for joint paratope-epitope prediction. Search on Bibsonomy CoRR The full citation details ... 2021 DBLP  BibTeX  RDF
20Abdullah Al Saba, Maisha Adiba, Piyal Saha, Md. Ismail Hosen, Sajib Chakraborty, Ahm H. M. Nurun Nabi An in-depth in silico and immunoinformatics approach for designing a potential multi-epitope construct for the effective development of vaccine to combat against SARS-CoV-2 encompassing variants of concern and interest. Search on Bibsonomy Comput. Biol. Medicine The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Abbas Khan, Shahzeb Khan, Shoaib Saleem, N. Nizam-Uddin, Anwar Mohammad, Taimoor Khan, Sajjad Ahmad, Muhammad Arshad 0013, Syed Shujait Ali, Muhammad Suleman, Dong-Qing Wei Immunogenomics guided design of immunomodulatory multi-epitope subunit vaccine against the SARS-CoV-2 new variants, and its validation through in silico cloning and immune simulation. Search on Bibsonomy Comput. Biol. Medicine The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Muhammad Tahir Ul Qamar, Sajjad Ahmad, Israr Fatima, Faisal Ahmad, Farah Shahid, Anam Naz, Sumra Wajid Abbasi, Abbas Khan, Muhammad Usman Mirza, Usman Ali Ashfaq, Ling-Ling Chen Designing multi-epitope vaccine against Staphylococcus aureus by employing subtractive proteomics, reverse vaccinology and immuno-informatics approaches. Search on Bibsonomy Comput. Biol. Medicine The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Samira Sanami, Morteza Alizadeh, Masoud Nosrati, Korosh Ashrafi Dehkordi, Fatemeh Azadegan-Dehkordi, Shahram Tahmasebian, Hamed Nosrati, Mohammad-Hassan Arjmand, Maryam Ghasemi-Dehnoo, Ali Rafiei, Nader Bagheri Exploring SARS-COV-2 structural proteins to design a multi-epitope vaccine using immunoinformatics approach: An in silico study. Search on Bibsonomy Comput. Biol. Medicine The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Mateusz Sikora, Sören von Bülow, Florian E. C. Blanc, Michael Gecht, Roberto Covino, Gerhard Hummer Computational epitope map of SARS-CoV-2 spike protein. Search on Bibsonomy PLoS Comput. Biol. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Sarah A. Robinson, Matthew I. J. Raybould, Constantin Schneider, Wing Ki Wong, Claire Marks, Charlotte M. Deane Epitope profiling using computational structural modelling demonstrated on coronavirus-binding antibodies. Search on Bibsonomy PLoS Comput. Biol. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Matthias Niemann, Nils Lachmann, Kirsten Geneugelijk, Eric Spierings Computational Eurotransplant kidney allocation simulations demonstrate the feasibility and benefit of T-cell epitope matching. Search on Bibsonomy PLoS Comput. Biol. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Daniel R. Ripoll, Sidhartha Chaudhury, Anders Wallqvist Using the antibody-antigen binding interface to train image-based deep neural networks for antibody-epitope classification. Search on Bibsonomy PLoS Comput. Biol. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Fariya Khan, Ajay Kumar An integrative docking and simulation-based approach towards the development of epitope-based vaccine against enterotoxigenic Escherichia coli. Search on Bibsonomy Netw. Model. Anal. Health Informatics Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Amirreza Javadi Mamaghani, Zahra Arab-Mazar, Siamak Heidarzadeh, Mohammad Mehdi Ranjbar, Shima Molazadeh, Sama Rashidi, Farzad Niazpour, Mohadeseh Naghi Vishteh, Homayoon Bashiri, Arezoo Bozorgomid, Hamed Behniafar, Mohammad Ashrafi In-silico design of a multi-epitope for developing sero-diagnosis detection of SARS-CoV-2 using spike glycoprotein and nucleocapsid antigens. Search on Bibsonomy Netw. Model. Anal. Health Informatics Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Amit Joshi, Dinesh Chandra Pathak, M. Amin-ul Mannan, Vikas Kaushik In-silico designing of epitope-based vaccine against the seven banded grouper nervous necrosis virus affecting fish species. Search on Bibsonomy Netw. Model. Anal. Health Informatics Bioinform. The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Aviral Chharia, Apurva Narayan A novel fuzzy approach towards in silico B-cell epitope identification inducing antigen-specific immune response for Vaccine Design. Search on Bibsonomy BIBE The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
20Xiao Yuan, Daniel Bibl, Kahlil Khan, Lei Sun Predicting Multi-Epitope Vaccine Candidates Using Natural Language Processing and Deep Learning. Search on Bibsonomy BIBE The full citation details ... 2021 DBLP  DOI  BibTeX  RDF
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